Update: Dealer called this afternoon right before closing and said it's ready for pickup - they replaced the batteries and performed a software update. They apparently did not address the other issues I asked them about, so I imagine I won't be able to pick it up until mid next week.
I am not confident that this is going to fix the issue honestly. I have a sneaking suspicion this will happen again, which will be the 3rd time and take it well over 30 days of ram having my truck which means it's lemon time. We shall see.